PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8139852.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family MYB_related
Protein Properties Length: 177aa    MW: 19562.6 Da    PI: 4.3255
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8139852.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.37e-081232447
                               HHHHHHHHTTTS-HHHHHHHHHHH CS
            Myb_DNA-binding 24 WktIartmgkgRtlkqcksrwqky 47
                               W++Ia +++ gRt++++k++w++ 
  Rmu_co8139852.1_g000001.1  1 WSLIAGRIP-GRTDNEIKNYWNSI 23
                               *********.***********975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    
WSLIAGRIPG RTDNEIKNYW NSILKKNVGE EKERESEVSR NEIFKKNLPS LAEDDGHPHL  60
TKCDEVLGGG GGLVCFASDV NVEEDHRRRC LGRTSTDTTT LSPGVGVEIG GGANKDIQPT  120
GDDLNYNAIA WKDSIMDLNG GQLDISEFLQ SDFSTFWDSD RLMNFEIGGC STMNYDL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G14750.18e-12MYB family protein