PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8140416.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family MYB_related
Protein Properties Length: 80aa    MW: 9660.09 Da    PI: 11.0467
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8140416.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.91.1e-08951347
                               SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
            Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                               +WT +E++ +  a +q G++ +++I  +++  +   q++++++ +
  Rmu_co8140416.1_g000001.1  9 AWTHQEEQSFFAALRQVGKN-FEKITCRVQ-SKNKDQVRHYYYRL 51
                               6*****************99.*********.***********976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 80 aa     Download sequence    
KKPTRQWAAW THQEEQSFFA ALRQVGKNFE KITCRVQSKN KDQVRHYYYR LVRRMNKLLG  60
PGLYLDSRNS KDTNAAMLRW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36960.11e-47MYB_related family protein