PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8141282.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family C3H
Protein Properties Length: 129aa    MW: 12791 Da    PI: 6.9135
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8141282.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH37.15.3e-12326427
                               ---SGGGGTS--TTTTT-SS-SSS CS
                    zf-CCCH  4 elCrffartGtCkyGdrCkFaHgp 27
                               +lC ++a+ G Ck+G+ CkF H++
  Rmu_co8141282.1_g000001.1  3 PLCTHYAQRGACKFGAACKFDHPM 26
                               89********************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 129 aa     Download sequence    
GAPLCTHYAQ RGACKFGAAC KFDHPMGTLS YSPSASSLTD MPVAPYPVGS SIGTLAPSSS  60
SSELRPELNS GTSKDSVSAR MSSSLSTVSG SVGSTVSKDG VAHLGGQLSA QGSGPSTTSD  120
NSTECHSSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47850.26e-20C3H family protein