PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8144300.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family NAC
Protein Properties Length: 60aa    MW: 6985.15 Da    PI: 5.784
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8144300.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM57.35.5e-181460148
                        NAM  1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp 48
                               lppGfrFhPtdeelv +yLk+kv + +l++ ++i+ev+++k++PwdLp
  Rmu_co8144300.1_g000001.1 14 LPPGFRFHPTDEELVLQYLKRKVYSCPLPA-SIIPEVEVCKSDPWDLP 60
                               79****************************.89**************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 60 aa     Download sequence    
MEKLSFVRNG ELRLPPGFRF HPTDEELVLQ YLKRKVYSCP LPASIIPEVE VCKSDPWDLP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.13e-30NAC family protein