PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8167220.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family MYB_related
Protein Properties Length: 176aa    MW: 19665.8 Da    PI: 4.4508
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8167220.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding36.79.9e-122281947
                               TTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
            Myb_DNA-binding 19 lGggtWktIartmgkgRtlkqcksrwqky 47
                               +G++ W+tIar ++ gRt++ +k++w++ 
  Rmu_co8167220.1_g000001.1  2 HGNK-WATIARLLP-GRTDNAIKNHWNST 28
                               9***.*********.***********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    
LHGNKWATIA RLLPGRTDNA IKNHWNSTLR RRRLAESSSA SSELKRLIGA TSDDPETKRQ  60
CLRGASAEED SFKAVAAGVE GVLTSLTLSP PGQKVENEVV LKSEEVGEEE EEDNDDHQEE  120
AVDDEEKCTV EMEETCLMTM MQRMIAQEVR NYIESLRAEN GLVFGLQSTV QNDRKC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G09230.11e-12MYB family protein