PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_co8175406.1_g000001.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

TCP

Protein Properties

Length: 158aa MW: 17446.6 Da PI: 8.6619

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_co8175406.1_g000001.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	68.3	2.7e-21	23	113	1	88
TCP 1 aagkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt........ssssaseceae 76 a+g+kd+h k++ ++g+Rd vRl a++a++f+ +q++L +d +s +++ L+++ak+a+ el+ + +s ++ Rmu_co8175406.1_g000001.1 23 ATGRKDSHNKVCIAKGPRDHHVRLAAHTAIQFYYVQNRLRYDLPSMAVDCLIKKAKAAMEELPPWnpnsifvqT-TS----SPT 101 589*************************************************************9444444321.11....222 PP TCP 77 sssssasnsssg 88 ++++ +++ s g Rmu_co8175406.1_g000001.1 102 ARRNGGQQRSGG 113 333333322222 PP

Sequence ? help Back to Top
Protein Sequence Length: 158 aa Download sequence
MGESHNNLHH RAMTEARGHI LRATGRKDSH NKVCIAKGPR DHHVRLAAHT AIQFYYVQNR 60 LRYDLPSMAV DCLIKKAKAA MEELPPWNPN SIFVQTTSSP TARRNGGQQR SGGAGESEQL 120 EFSAGEDGVE AEVNVNLCLP TIASDLSWAR GRSCRLDS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15030.2	6e-32	TCP family protein