PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8184858.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family B3
Protein Properties Length: 227aa    MW: 26436.3 Da    PI: 9.1664
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8184858.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B338.71.8e-12104190180
                                EEEE-..-HHHHT.T-EE--HHH.HTT.........---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT- CS
                         B3   1 ffkvltpsdvlks.grlvlpkkfaeeh.........ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangL 74 
                                f+k+lt sdv    +rl ++k+ +++h         ++  +e++++t +++ g+++ +k++ + ++  +vlt+GWk F+++++L
  Rmu_co8184858.1_g000001.1 104 FEKQLTCSDVRDDqSRLAMSKEDVQKHlmpllneseDL--NEGIDVTTYNLAGKEYPMKFKTWVSK-IHVLTGGWKAFCRDHQL 184
                                89*******9987799**************99985444..48899***************989987.789************** PP

                                -TT-EE CS
                         B3  75 kegDfv 80 
                                 +   +
  Rmu_co8184858.1_g000001.1 185 VQTQHF 190
                                854433 PP
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    
EIQKLEDTKR KSVGHIRVYP NPETKPRALQ IEKQEEDTVN VAQGLSRKQQ LQQGPMRKAV  60
HTEEQEAMNG AKPQQGLFYG DYTPPNLPPV PSLHKLIEIC SEPFEKQLTC SDVRDDQSRL  120
AMSKEDVQKH LMPLLNESED LNEGIDVTTY NLAGKEYPMK FKTWVSKIHV LTGGWKAFCR  180
DHQLVQTQHF VTVWMFRNIA TRNLCFVIEV RRLPVFETIK RRRIRQN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1220224KRRRI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G03170.12e-30B3 family protein