PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8188524.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family MYB_related
Protein Properties Length: 53aa    MW: 6280.03 Da    PI: 7.5392
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8188524.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding33.31.1e-102053136
                               TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS- CS
            Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRt 36
                               r +WT+eE++++++a +++  + Wk+I   +g  +t
  Rmu_co8188524.1_g000001.1 20 RESWTEEEHDKFLEALQLFDRD-WKKIEDFVG-SKT 53
                               789*****************77.******999.665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 53 aa     Download sequence    
MSSDASGKKV RKPYTITKSR ESWTEEEHDK FLEALQLFDR DWKKIEDFVG SKT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G09600.25e-30MYB_related family protein