PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8189974.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family Trihelix
Protein Properties Length: 221aa    MW: 24816.6 Da    PI: 9.9678
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8189974.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix605.8e-1913101186
                   trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm...rergferspkqCkekwenlnkrykkikegekkrtsessstcpy 81 
                                +Wt++e + Li a+r+++ +lrr++lk ++W++v+++    +     +++ qC++k+e+l+kr++++k+++++   + ss++++
  Rmu_co8189974.1_g000001.1  13 CWTQDEARSLILAYRDRWFALRRTNLKSADWDHVAAATaaeAPSSPPKTALQCRHKMEKLRKRFRAEKQRASGYPGRFSSSWAL 96 
                                8************************************96444444589*************************9999******* PP

                   trihelix  82 fdqle 86 
                                f+ ++
  Rmu_co8189974.1_g000001.1  97 FHLMD 101
                                **998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    
ALPTKPRRVP PPCWTQDEAR SLILAYRDRW FALRRTNLKS ADWDHVAAAT AAEAPSSPPK  60
TALQCRHKME KLRKRFRAEK QRASGYPGRF SSSWALFHLM DEMESGPDPG LDSGGEFGGG  120
FSLKARNLVK FNGNVGRDFS PDVDENSSFY SEAEDYVNQG FRPKSNGKTD VNLKHSFRQH  180
GDYGVDIRSD RDFVPAGFQP KSSGIVDGNA KRNVRFKEFD G
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44730.12e-27Trihelix family protein