PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8196374.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family GRAS
Protein Properties Length: 152aa    MW: 17198.7 Da    PI: 7.1951
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8196374.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS108.78e-34371511121
                       GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdg.dpmqRlaayfteALaarlarsvselykalppsetseknsseelaalkl 83 
                                l++lL+ecA a+s ++  +a+++L +l ++asp+g +  +R++ayf++A+++r+++s+ ++++ l   ++          a+++
  Rmu_co8196374.1_g000001.1  37 LITLLFECAVAISVENPGEAHRMLLELTQMASPYGpSCAERVVAYFAKAMSSRVLNSWLGICSPLVNYKS-------IHGAFQV 113
                                5789*******************************9999***********************87765554.......467999* PP

                       GRAS  84 fsevsPilkfshltaNqaIleavegeervHiiDfdisq 121
                                f+ +sP++kf+h+t NqaIlea+++ +rvHiiD+di+q
  Rmu_co8196374.1_g000001.1 114 FNTISPFIKFAHFTSNQAILEAFHRRDRVHIIDLDIMQ 151
                                ************************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 152 aa     Download sequence    
ADRVDYDLQW GNELQLHAEN NRRARGLSKL DQHGLTLITL LFECAVAISV ENPGEAHRML  60
LELTQMASPY GPSCAERVVA YFAKAMSSRV LNSWLGICSP LVNYKSIHGA FQVFNTISPF  120
IKFAHFTSNQ AILEAFHRRD RVHIIDLDIM QV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54220.12e-37GRAS family protein