PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8198010.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 143aa    MW: 16196.8 Da    PI: 7.5079
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8198010.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.71.6e-191668156
                        AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                               s+y+G r+++ +gr++AeIrdp+ ng  +r +lg+f+tae+Aa+a+++a+ +l+g+
  Rmu_co8198010.1_g000001.1 16 SRYRGTRRRP-WGRYAAEIRDPTRNG--ARLWLGTFDTAEQAARAYDRAAFRLRGN 68
                               79********.**********98887..**************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 143 aa     Download sequence    
MEGKREENKP KARDQSRYRG TRRRPWGRYA AEIRDPTRNG ARLWLGTFDT AEQAARAYDR  60
AAFRLRGNLA ILNFPNEYQY HNSSTSSFVP SDSTSSSAAI SSAAADDNGK PFCKQESEVI  120
VFEYLDNMIL EELLAVKEDT HGN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23230.13e-17ERF family protein