PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8202712.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family NAC
Protein Properties Length: 116aa    MW: 13321.1 Da    PI: 8.4472
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8202712.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM40.86.7e-1313113695
                        NAM   6 rFhPtdeelvveyLkkkvegkklelee..vikevdiy...kvePwdLpk...kvka.eekewyfFskrdkkyatgkrknratk. 79 
                                 FhPt+ elv ++L +k++  + + ++  +++++ iy    + Pw++ +   ++k  +++ +yfFs ++k +++++r++ +++ 
  Rmu_co8202712.1_g000001.1  13 TFHPTEAELVGFFLYNKISMASSSGNQiqTFPKICIYgetGLPPWEIWRiyqQFKFpHQDFLYFFSWTKKVSPNKSRNSGTVSs 96 
                                5*****************99995552211233433332115689999632333333334456************9999985433 PP

                        NAM  80 .sgyWkatgkdkevlsk 95 
                                  g+W++t   ++v+ +
  Rmu_co8202712.1_g000001.1  97 dGGTWRETEAARPVYIR 113
                                499***********985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 116 aa     Download sequence    
MTLDQLDVGV VKTFHPTEAE LVGFFLYNKI SMASSSGNQI QTFPKICIYG ETGLPPWEIW  60
RIYQQFKFPH QDFLYFFSWT KKVSPNKSRN SGTVSSDGGT WRETEAARPV YIRGSE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62380.13e-07NAC family protein