PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_co8212274.1_g000001.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

NAC

Protein Properties

Length: 196aa MW: 22807 Da PI: 8.5561

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_co8212274.1_g000001.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	157	7.8e-49	15	142	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyat.gkrknratksgy 82 +pGfrFhPt+eelv +yLk+k+ +k+++l ++i+e+d+yk+eP++Lp + +++++ +w+fF +r+ ky++ +r nrat++gy Rmu_co8212274.1_g000001.1 15 QPGFRFHPTEEELVLYYLKRKICHKRFKL-NIITETDVYKCEPEELPglSLLQTGDLQWFFFNPRNCKYPNkPTRINRATRHGY 97 69*************************.89***********6447777888*********8468****** PP NAM 83 WkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 Wk tgkd+++++ +++ vg+kktLvfy+grap+g++tdWvmhey+l Rmu_co8212274.1_g000001.1 98 WKVTGKDRTITN-NSRSVGVKKTLVFYTGRAPSGNRTDWVMHEYTL 142 ********.999**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 196 aa Download sequence
MMVSADDLVI VFRQQPGFRF HPTEEELVLY YLKRKICHKR FKLNIITETD VYKCEPEELP 60 GLSLLQTGDL QWFFFNPRNC KYPNKPTRIN RATRHGYWKV TGKDRTITNN SRSVGVKKTL 120 VFYTGRAPSG NRTDWVMHEY TLHDEELKRC GNVPDAYALC KVYKKSGLGP KNGEQYGAPF 180 KEEDCSDMDE VQETPV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34190.1	2e-86	NAC family protein