PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_co8231061.1_g000001.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

AP2

Protein Properties

Length: 108aa MW: 11537.9 Da PI: 10.7224

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_co8231061.1_g000001.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	23.3	1.6e-07	74	104	1	29
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng.krk 29 s y+GV++++++gr++A+++d ++n+ ++k Rmu_co8231061.1_g000001.1 74 SIYRGVTRHRWTGRYEAHLWDkSTWNQnQNK 104 57*******************6666665443 PP

Sequence ? help Back to Top
Protein Sequence Length: 108 aa Download sequence
MASSSSDPGP KTESGSGSGG GAEASEAVAA AAAAVATDQQ LLYRGLKKAK KERGCTAKER 60 ISKMPPCAAG KRSSIYRGVT RHRWTGRYEA HLWDKSTWNQ NQNKKGKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G41710.1	2e-46	AP2 family protein