PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8234847.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family MYB_related
Protein Properties Length: 110aa    MW: 11969.5 Da    PI: 10.3198
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8234847.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding59.95.5e-193782147
                               TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
            Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                               rg+W++ Ede l ++v+q+G ++W+ Iar ++ gR++k+c++rw + 
  Rmu_co8234847.1_g000001.1 37 RGSWSPKEDEMLTRLVTQFGARNWSVIARGIP-GRSGKSCRLRWCNQ 82
                               89******************************.***********985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 110 aa     Download sequence    
MTVPNDAASK LDSHRAEPDA SSSLADDGGE VAAGKVRGSW SPKEDEMLTR LVTQFGARNW  60
SVIARGIPGR SGKSCRLRWC NQLNPGVKRK PFSGKPPFAV EFSVDFGFFK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G55730.19e-28MYB family protein