PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_co8238721.1_g000001.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

TALE

Protein Properties

Length: 143aa MW: 16870.9 Da PI: 9.7439

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_co8238721.1_g000001.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	26.2	1.4e-08	92	125	21	54
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 k +yp++e++++L +++gL+ +q+ +WF N+R + Rmu_co8238721.1_g000001.1 92 KWPYPTEEDKARLVQETGLQLKQINNWFINQRKR 125 469*****************************87 PP
2	ELK	30.8	6.5e-11	46	67	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELKh+L+++Y+++++++++E++ Rmu_co8238721.1_g000001.1 46 ELKHELKQGYKEKIVDIREEIL 67 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 143 aa Download sequence
MSDDDEQFDS DINSYDASLD GHDTMGFGPL VPTESERSLM ERVRQELKHE LKQGYKEKIV 60 DIREEILRKR RAGKLPGDTT SVLKAWWQSH SKWPYPTEED KARLVQETGL QLKQINNWFI 120 NQRKRNWHSN LSTTSVLKSK RKR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	123	143	RKRNWHSNLSTTSVLKSKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G25220.2	4e-87	TALE family protein