PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_co8247875.1_g000001.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

Protein Properties

Length: 131aa MW: 14886.1 Da PI: 10.7772

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_co8247875.1_g000001.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	59.3	6.6e-19	51	128	5	86
-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS B3 5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 ++s++ + + l+lp kfa+++ k +++ +l+ s ++W+v++ r r+++++GW eFv++n+Lk+gD ++F+l++ Rmu_co8247875.1_g000001.1 51 SLHSSYITGHYLYLPAKFANRYLVK--QPRHAILRVASKKTWSVNV--RYAAARTTFQTGWFEFVQDNDLKQGDACIFMLTD 128 45789999999*********544..55679**********..77778899*********************876 PP

Sequence ? help Back to Top
Protein Sequence Length: 131 aa Download sequence
MRPSSRTQKF PEGGPEVPRK MPGPVMASSG KYIALQRANG FKSANPDFRI SLHSSYITGH 60 YLYLPAKFAN RYLVKQPRHA ILRVASKKTW SVNVRYAAAR TTFQTGWFEF VQDNDLKQGD 120 ACIFMLTDNI K

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G49480.1	8e-18	B3 family protein