PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8256289.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family NF-YC
Protein Properties Length: 183aa    MW: 20214.7 Da    PI: 5.21
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8256289.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC42.81.1e-13551361999
                      NF-YC  19 helPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrt.difdflvdivprd 99 
                                 elP  r+kki+k d d+++i +ea  l+s + +lf+  l+  s   a e+kr+ +k   i +a +r   + dflvd+ p +
  Rmu_co8256289.1_g000001.1  55 LELPTGRVKKIMKLDRDINKINSEALHLVSCSAQLFLQFLAEASGEAAMEKKRKIVKLEHIRTAAKRHrATRDFLVDELPVQ 136
                                589**********************************************************99988762689*****99976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    
MTRPESSEEN AVGSESEEDN IAPIEIASEE ENAATVQPLS EGEKAKANGL EPIRLELPTG  60
RVKKIMKLDR DINKINSEAL HLVSCSAQLF LQFLAEASGE AAMEKKRKIV KLEHIRTAAK  120
RHRATRDFLV DELPVQSQPS DQKSADRSRS RPVADNPAPA GTRRIDDFFS KPATKSPIEV  180
EES
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43250.12e-44NF-YC family protein