PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8258023.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family NF-X1
Protein Properties Length: 188aa    MW: 21032.4 Da    PI: 8.3155
Description NF-X1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8258023.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-NF-X126.31.5e-08114132119
                   zf-NF-X1   1 CGkHkCqklCHeGpCppCp 19 
                                CG H+C+++CHeGpCppC+
  Rmu_co8258023.1_g000001.1 114 CGVHRCSEICHEGPCPPCR 132
                                ******************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    
QSKAAEVSLW NCPKCRVEYT QSQIPKIYRC FCGKLENPPS DDPWILPHSC GEVCNRPLKH  60
NCGHHCLLLC HPGPCPSCPK LVKARCFCGS VQDMRRCGFK NFSCNNACEK KLACGVHRCS  120
EICHEGPCPP CRVRGRYRCQ CGKREEEKEC CERLDFRCEE NCARRGVIAG SALRLAEQLS  180
LRGVAAGA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G05660.17e-47NF-X1 family protein