PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8258885.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family NAC
Protein Properties Length: 145aa    MW: 16276.4 Da    PI: 10.5451
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8258885.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM80.73.1e-2548253127
                        NAM  53 aeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk....kgelvglkktLvfykgrapkgektdWvmheyr 127
                                +++++w+fF++r++++a+g r++r t++gyWkatg+   v+++    ++ ++glk+t+vfy+grap+g+kt+W m+ey+
  Rmu_co8258885.1_g000001.1   4 GDQEQWFFFIPRQESEARGGRPKRLTTTGYWKATGSPSYVFTSssntNHGAIGLKRTMVFYTGRAPNGSKTEWKMNEYK 82 
                                46789************************************9866555556***************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 145 aa     Download sequence    
MCHGDQEQWF FFIPRQESEA RGGRPKRLTT TGYWKATGSP SYVFTSSSNT NHGAIGLKRT  60
MVFYTGRAPN GSKTEWKMNE YKAIDGDNQL QAPSSSNAAP APPLRQEFSL CRVYKKSKCL  120
RAFDRRPSGT GDIMRRPTVT VHLPA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22380.16e-47NAC family protein