PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8269835.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 190aa    MW: 21589.3 Da    PI: 9.7185
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8269835.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.59.1e-2096146256
                        AP2   2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkklege 56 
                                +++GVr+++ +g+W+AeIrd +     r  r++lg+f taeeAa  +++a+ +l+g+
  Rmu_co8269835.1_g000001.1  96 KFRGVRQRP-WGKWAAEIRDpV-----RkSRVWLGTFQTAEEAALVYDRAAIQLRGH 146
                                89*******.**********44.....55**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    
MDSNYPTKYT EKRTLTKKLV KHFPNVAVPK IVRISVTDED ATDTSSDEEE QDQQQQRLTK  60
RVINEVRIEE ESEAVRVLLA KNQKPKPKPL PEEKRKFRGV RQRPWGKWAA EIRDPVRKSR  120
VWLGTFQTAE EAALVYDRAA IQLRGHNALT NIIAPPSKVL ISDHDSSSNE SSSMNNLSCS  180
NASSSIDHIV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.13e-31ERF family protein