PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8273153.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family NAC
Protein Properties Length: 95aa    MW: 11515.1 Da    PI: 8.7319
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8273153.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM41.25.2e-131595273
                        NAM  2 ppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykv.ePwdLpkkvka.......eekewyfFskrdkkyatgkr 73
                                pG rF P d+elv +yLk+ ++g++++  +  + ++d+y+  ePw++ +++k+        +k++yfF++++k ++t+kr
  Rmu_co8273153.1_g000001.1 15 LPGQRFCPMDDELVLFYLKPMLSGQNVPGRNRvVFDCDLYSQqEPWEIWEAFKTrrphdlrLNKDIYFFTQHKKMSSTDKR 95
                               59************************8775544999**997659****753333223333334588*******99988765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 95 aa     Download sequence    
MQREFPMENS RGNQLPGQRF CPMDDELVLF YLKPMLSGQN VPGRNRVVFD CDLYSQQEPW  60
EIWEAFKTRR PHDLRLNKDI YFFTQHKKMS STDKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24430.22e-07NAC family protein