PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_co8276131.1_g000001.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

TCP

Protein Properties

Length: 166aa MW: 17962.5 Da PI: 8.5165

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_co8276131.1_g000001.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	120	2.9e-37	53	131	2	74
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssa...sec...e 74 +k+++++++hTkv+gR+RRvR++a caar+F+L++eLG+++d++ti WLl+ a+pai+++tgt++ +a s c + Rmu_co8276131.1_g000001.1 53 VVKRSSTKDRHTKVEGRGRRVRMPAACAARVFQLTRELGHKSDGETIRWLLEHAEPAIIAATGTGTVPAiavSVCgtlK 131 5799************************************************************888884444444321 PP

Sequence ? help Back to Top
Protein Sequence Length: 166 aa Download sequence
MEPNQRQSLE ETDGITNPSV SGQQFPAVAK KEEFEDGSLS MGLIPVPAPA KPVVKRSSTK 60 DRHTKVEGRG RRVRMPAACA ARVFQLTREL GHKSDGETIR WLLEHAEPAI IAATGTGTVP 120 AIAVSVCGTL KIPTSSLANP NGEVSELPRK KRKLHCNSDF VDVEEL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	148	154	PRKKRKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45680.1	5e-54	TCP family protein