PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_co8276569.1_g000001.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

FAR1

Protein Properties

Length: 193aa MW: 22054.8 Da PI: 7.0862

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_co8276569.1_g000001.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	63.1	7.8e-20	42	125	4	90
FAR1 4 neYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnH 87 n+YA++ GFs+rk + +k +n+ +r+f Cskeg+ +e+ e ++ +r etrtgCka ++ + e +g+w+++ + +HnH Rmu_co8276569.1_g000001.1 42 NNYAYKKGFSIRKGHLRKDAQNN-PRQREFLCSKEGFLPDEDLC-EVKKVRRFETRTGCKAAFRFNVE-NGVWKISYTNPHHNH 122 89**************96666.9*********999988.899999************9.************* PP FAR1 88 ela 90 e+a Rmu_co8276569.1_g000001.1 123 EFA 125 *96 PP

Sequence ? help Back to Top
Protein Sequence Length: 193 aa Download sequence
MDSGFQKKML ENGDEGYQFG DCEELKLGME VSSEAEAYEL CNNYAYKKGF SIRKGHLRKD 60 AQNNPRQREF LCSKEGFLPD EDLCEVKKVR RFETRTGCKA AFRFNVENGV WKISYTNPHH 120 NHEFASPEER KFLRSGRNIP SVRAAMVGYM VGESSTPVEA YPILEKECGS ADSVGFTHKD 180 YHSLLQSKKG EML

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	4e-15	FAR1 family protein