PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8279167.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family NAC
Protein Properties Length: 218aa    MW: 24392.7 Da    PI: 5.8753
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8279167.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM44.16.4e-1414187128
                        NAM  87 gkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                                gkd++v++ +++++g +ktLvfy+grap g +t+W+mheyrl
  Rmu_co8279167.1_g000001.1   1 GKDRKVVC-QSSVTGYRKTLVFYRGRAPLGDRTEWIMHEYRL 41 
                                89******.9999***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    
GKDRKVVCQS SVTGYRKTLV FYRGRAPLGD RTEWIMHEYR LNDDFAQGSP GHQGVFALCR  60
VVKKKEHTQK ANDSNGEPKA KTTGSTSSNG DLTSTRNSNE TFSISAGMSS QVNYQHDESR  120
HSSHTTSPYE VSPMAEFEPA PRGTNPADFW ISPDLILDSS KDYPQLQGAV PNYFPQYEFP  180
STMSPWQSYE HTEISPSSSY SNFGDFQMAD DMNQMASM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17980.12e-40NAC family protein