PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8288283.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WRKY
Protein Properties Length: 189aa    MW: 21352.6 Da    PI: 5.9642
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8288283.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY31.53.4e-102293159
                               T---EEEEEE-SSSTTEEEEEEES--SS- CS
                       WRKY 31 gCpvkkkversaedpkvveitYegeHnhe 59
                               +Cpvkkkvers   ++++ei+Y+g+Hnh+
  Rmu_co8288283.1_g000001.1  2 NCPVKKKVERSP-TGEITEIIYKGQHNHD 29
                               7***********.9**************7 PP
2WRKY36.31.1e-11144165122
                                ---SS-EEEEEEE--TT-SS-E CS
                       WRKY   1 ldDgynWrKYGqKevkgsefpr 22 
                                ldDgy+WrKYGqK+vkg+++pr
  Rmu_co8288283.1_g000001.1 144 LDDGYRWRKYGQKVVKGNPHPR 165
                                59*******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    
LNCPVKKKVE RSPTGEITEI IYKGQHNHDP PQPNKRAKDG GGQNGHMDSQ PKLENGLQRR  60
VGDSNRSSEA VPERDYEHAQ TAPVQLPSDS EDLGDAETRE EGDVDEPNPK RRNIDGVASE  120
VALPHKTVTE PKIIVQTRSE VDLLDDGYRW RKYGQKVVKG NPHPRWELSP YVYLLVFSFS  180
DLRVFNSEC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03340.11e-46WRKY family protein