PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8288493.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family NAC
Protein Properties Length: 162aa    MW: 19163.6 Da    PI: 6.3591
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8288493.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM821.2e-25161491128
                        NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleev.ikevd.iykvePwdLpk......kvkaeek......ewyfFskrdkkyat 70 
                                l pG+rF P +eel+ +yL++kv+g++++ e+  i + +  ++ ePwd+        k     +      ++yfF++r+k + +
  Rmu_co8288493.1_g000001.1  16 LLPGYRFCPLEEELILRYLCPKVKGEEVPGEDYlIFNSNlYCEQEPWDIWDmykerrK-----NdlrfnkDLYFFTQRKKMTVN 94 
                                579************************99988767777615788*****642333221.....123333377************ PP

                        NAM  71 gkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                                 +rk r++ sg+Wk     k+v++ +g +vg +k +++ k  + + ++ +W+m e++l
  Rmu_co8288493.1_g000001.1  95 ASRKGRSIGSGTWKGGDAAKNVYA-SGIVVGYRKRFTYEK--KGSEQHGRWIMLEFEL 149
                                ************************.999*********984..4444689*******97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 162 aa     Download sequence    
MDIHEDGNEL HDEHQLLPGY RFCPLEEELI LRYLCPKVKG EEVPGEDYLI FNSNLYCEQE  60
PWDIWDMYKE RRKNDLRFNK DLYFFTQRKK MTVNASRKGR SIGSGTWKGG DAAKNVYASG  120
IVVGYRKRFT YEKKGSEQHG RWIMLEFELD HSQVGMLDQQ VS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46770.16e-18NAC family protein