PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8293081.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family NAC
Protein Properties Length: 125aa    MW: 14520.6 Da    PI: 9.3966
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8293081.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM63.66e-20101251106
                        NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykv.ePwdLpk.....kvka....eekewyfFskrdkkyatgkr 73 
                                l pG rF P ++el+ +yLk+ v+gk+++  +  + ++d+y   ePw++ +     +  a    ++k++yfF++++kk+++++r
  Rmu_co8293081.1_g000001.1  10 LLPGQRFVPMEDELLLCYLKPMVHGKQVPGRDLvVFDCDLYGDqEPWEIWEtyksrR--AndlrKNKDLYFFAQQKKKTPKDSR 91 
                                579************************99988769999*996549****74244431..1445466799*************** PP

                        NAM  74 knr.atksgyWkatgkdkevlskkgelvglkktL 106
                                  r + + g+Wk+   +k +  ++++++g kkt+
  Rmu_co8293081.1_g000001.1  92 VGRtVGRGGTWKEESGKKVISPETNRVIGYKKTF 125
                                ***666799****9999999999999******96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 125 aa     Download sequence    
MDNGGPDDHL LPGQRFVPME DELLLCYLKP MVHGKQVPGR DLVVFDCDLY GDQEPWEIWE  60
TYKSRRANDL RKNKDLYFFA QQKKKTPKDS RVGRTVGRGG TWKEESGKKV ISPETNRVIG  120
YKKTF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02450.22e-08NAC family protein