PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_co8296705.1_g000001.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

MYB

Protein Properties

Length: 118aa MW: 13311.2 Da PI: 9.6358

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_co8296705.1_g000001.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	46	1.2e-14	37	84	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+ Ed +l ++v + G g+W+++ g++R++k+c++rw ++l Rmu_co8296705.1_g000001.1 37 KGPWTAVEDRILMEYVSKQGEGNWNSVQWNSGLKRCGKSCRLRWANHL 84 79******************************************9996 PP
2	Myb_DNA-binding	26.4	1.6e-08	90	117	1	29
TSSS-HHHHHHHHHHHHHTTTT-HHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIar 29 +g++T+eE+ l++++++++G++ W++ a+ Rmu_co8296705.1_g000001.1 90 KGAFTPEEERLILELHAKYGNK-WARMAS 117 799*****************.9885 PP

Sequence ? help Back to Top
Protein Sequence Length: 118 aa Download sequence
MAHNGINDIN GTAMYGEGNP SELSCVFMGG NNMGLRKGPW TAVEDRILME YVSKQGEGNW 60 NSVQWNSGLK RCGKSCRLRW ANHLRPNLKK GAFTPEEERL ILELHAKYGN KWARMASQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G32460.2	3e-47	MYB family protein