PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8300361.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family B3
Protein Properties Length: 79aa    MW: 9315.64 Da    PI: 9.8592
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8300361.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B344.72.4e-142781899
                               --HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                         B3 18 lpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                               lp  f+++h  k  ++  ++l  ++   W v+l +rk+     +++GW eFv+ ++LkegD + F+l+++++f + v++fr+
  Rmu_co8300361.1_g000001.1  2 LPSAFVQKHLDK--RPSHVSLWGSNDIYWPVELHFRKGA---SFQGGWIEFVQRHNLKEGDACGFELTEKRKFLFDVHIFRT 78
                               899******655..4447***************777765...58***********************999999999**9997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 79 aa     Download sequence    
KLPSAFVQKH LDKRPSHVSL WGSNDIYWPV ELHFRKGASF QGGWIEFVQR HNLKEGDACG  60
FELTEKRKFL FDVHIFRTT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49480.12e-12B3 family protein