PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8301593.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family C3H
Protein Properties Length: 152aa    MW: 15923 Da    PI: 8.8002
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8301593.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH37.44.3e-1297121226
                                -S---SGGGGTS--TTTTT-SS-SS CS
                    zf-CCCH   2 ktelCrffartGtCkyGdrCkFaHg 26 
                                ++++C++++rtG Ck+G++C+++H+
  Rmu_co8301593.1_g000001.1  97 GQSECQYYLRTGDCKFGSSCRYHHP 121
                                7899********************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 152 aa     Download sequence    
MVARPPLLPS SYVQSPYGPM LIPPGMVPFS GWSPYPAGAS PLASPSTQTA VGSGALYGIN  60
QLSPSAPAYT GIFPTVPFSL GPPTSSQKEQ SHPERPGQSE CQYYLRTGDC KFGSSCRYHH  120
PAEVVAPNTP VVLSSIGLPS RPVSRSFNSS AS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06410.15e-50C3H family protein