PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8310175.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family GRAS
Protein Properties Length: 160aa    MW: 17771.1 Da    PI: 5.9922
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8310175.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS154.41e-479147234374
                       GRAS 234 lsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWre 317
                                l Pkvv+vveq+++h ++sFl rf+ea++yysalfdsl+a++++eseer++vE++ll+rei+nv+a  g +r  + + +++Wre
  Rmu_co8310175.1_g000001.1   9 LAPKVVTVVEQDLSH-AGSFLGRFVEAIHYYSALFDSLSASYGEESEERHVVEQQLLSREIRNVLAVGGPSRSGEVK-FHNWRE 90 
                                78*************.899****************************************************888776.****** PP

                       GRAS 318 rleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                                +++++GF+ ++l  +aa+qa lll +++sdgy++ e++g+l lgWkd  L+++SaWr
  Rmu_co8310175.1_g000001.1  91 KFQQSGFRGISLAGNAATQATLLLGMFPSDGYTLVEDNGTLKLGWKDLCLLTASAWR 147
                                ********************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 160 aa     Download sequence    
MLDWSPLLLA PKVVTVVEQD LSHAGSFLGR FVEAIHYYSA LFDSLSASYG EESEERHVVE  60
QQLLSREIRN VLAVGGPSRS GEVKFHNWRE KFQQSGFRGI SLAGNAATQA TLLLGMFPSD  120
GYTLVEDNGT LKLGWKDLCL LTASAWRPPY LATTNPNLHY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54220.17e-89GRAS family protein