PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8315289.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family AP2
Protein Properties Length: 98aa    MW: 11255.6 Da    PI: 10.3537
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8315289.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP224.85.3e-086696336
                        AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkf 36
                               y+GV+++++ grW A+I  +     +k  +lg+f
  Rmu_co8315289.1_g000001.1 66 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTF 96
                               9***************988532...5*******9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 98 aa     Download sequence    
GYDKEEKAAR AYDLAALKYW GTSTTTNFPI SNYEKEVEEM KNCTRQEFVA SIRRKSSGFS  60
RGASMYRGVT RHHQHGRWQA RIGRVAGNKD LYLGTFSK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51190.11e-64AP2 family protein