PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_co8326225.1_g000001.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

bHLH

Protein Properties

Length: 316aa MW: 34072.6 Da PI: 7.5978

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_co8326225.1_g000001.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	20.4	9.3e-07	290	312	7	29
HHHHHHHHHHHHHHHHHHCTSCC CS HLH 7 erErrRRdriNsafeeLrellPk 29 ++ErrRR+++N+++ Lr+++Pk Rmu_co8326225.1_g000001.1 290 MAERRRRKKLNDRLYMLRSVVPK 312 79********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 316 aa Download sequence
MNNNGIQGHS DVRDLTFSPS FADPESLLLN QVDSSSSCSP SSSVFNNLDP SQVHYYLPQN 60 PSLSSLLNAV PNNPLDHGFD LGCEIGFLDN QGSGGGSSLM NRGGGVLTGF NDLSSNTHMQ 120 AQNLCSNLQF STTRLPHLLE NGNNFSGFRG VDDTSGNALF SNRSKMLRPL QPLSSVGAQP 180 TLFQKRAALR KNLGGLGSEG GLVLSNYEGD KGKRDMGEEN EKKRKFSGGD DGEDLSFDGS 240 GLNYDSDEFT ENTKMDENAK NGGNSSNANS TVTGGEHKGK KKGLPAKNLM AERRRRKKLN 300 DRLYMLRSVV PKISKV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	280	298	KKKGLPAKNLMAERRRRKK
2	292	299	ERRRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26744.1	7e-35	bHLH family protein