PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8327833.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family NAC
Protein Properties Length: 221aa    MW: 25195.8 Da    PI: 9.2544
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8327833.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM167.44.7e-52141391128
                        NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWk 84 
                                lppGfrF Ptdeel+v+yL++kv+g +++l ++i e+d+yk++Pw Lp+k+  +ekewyfFs+rd+ky++g+r+nr++ sgyWk
  Rmu_co8327833.1_g000001.1  14 LPPGFRFYPTDEELLVQYLCRKVAGYQFNL-QIIGEIDLYKFDPWVLPSKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWK 96 
                                79****************************.89***************7777799***************************** PP

                        NAM  85 atgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                                atg+dk +++ +g++vg+kk Lvfy g+apkg+kt+W+mheyrl
  Rmu_co8327833.1_g000001.1  97 ATGTDKIITT-EGRKVGIKKALVFYVGKAPKGTKTNWIMHEYRL 139
                                ******9999.999****************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    
MGVPETDPLS QLSLPPGFRF YPTDEELLVQ YLCRKVAGYQ FNLQIIGEID LYKFDPWVLP  60
SKAIFGEKEW YFFSPRDRKY PNGSRPNRVA GSGYWKATGT DKIITTEGRK VGIKKALVFY  120
VGKAPKGTKT NWIMHEYRLI EPSRKNGSSK LDEWVLCRIY KKSSGSSAVV QKPMSTMTNV  180
PSKEQSCNGS SSECSSQLDD VLEWLPEIED RFFTLPRINS L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27410.21e-121NAC family protein