PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8347871.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family HSF
Protein Properties Length: 208aa    MW: 24179.9 Da    PI: 10.7617
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8347871.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind115.73e-36201112102
                                HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESX CS
               HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhks 85 
                                Fl+k+y++++d+++++++sws+ g sfvv+d+++f  ++Lp+yFkh+nf+SFvRQLn+YgF+kv+ ++         weF+++ 
  Rmu_co8347871.1_g000001.1  20 FLNKTYDMVDDPSTNRIVSWSRGGGSFVVWDPHSFVMNLLPRYFKHNNFSSFVRQLNTYGFRKVDPDR---------WEFANEG 94 
                                9****************************************************************999.........******* PP

                                XXXXXXXXXXXXXXXXX CS
               HSF_DNA-bind  86 Fkkgkkellekikrkks 102
                                F +g+k+ll++i+r+k+
  Rmu_co8347871.1_g000001.1  95 FLRGQKHLLKNIRRRKT 111
                                ***************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    
MTVAPPQPME GLNDTGPPPF LNKTYDMVDD PSTNRIVSWS RGGGSFVVWD PHSFVMNLLP  60
RYFKHNNFSS FVRQLNTYGF RKVDPDRWEF ANEGFLRGQK HLLKNIRRRK TPSQPIPAHQ  120
ALGPCVEVGR FGLDGEVDRL RRDKQVLMME LVKLRQQQQS TRACLQAMEQ RLKGTEMKQQ  180
QMMAFLARAL QNPAFLQQLV QHKEKRKE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22830.11e-108HSF family protein