PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8349065.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family FAR1
Protein Properties Length: 213aa    MW: 23951.2 Da    PI: 7.552
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8349065.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR193.62.4e-29105192290
                       FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleH 85 
                                fYn Y+ ++GF++r+++ ++sk++g+i+ rtfvCskeg+r++++++ +k+ ++ra tr+gC a+l +kk + gkw+vtk+ +eH
  Rmu_co8349065.1_g000001.1 105 FYNVYGLRMGFNTRMNYLSRSKHDGTIIARTFVCSKEGYRKPDRRD-KKTVNPRAPTRVGCMAMLSIKKLNIGKWVVTKFIKEH 187
                                9******************************************999.9************************************ PP

                       FAR1  86 nHela 90 
                                nH+l 
  Rmu_co8349065.1_g000001.1 188 NHALI 192
                                **995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    
SIGTDQGKPV IFIAEFTYDS LNLHIFAVDS VLDINVNEEV STGSTDTEFK HSNDGALVGT  60
SLQKILWVVQ NDERTQNSSK DGSVVEVDEP YVGQEFDTEV NAQAFYNVYG LRMGFNTRMN  120
YLSRSKHDGT IIARTFVCSK EGYRKPDRRD KKTVNPRAPT RVGCMAMLSI KKLNIGKWVV  180
TKFIKEHNHA LIASKRPKGL IEDQIPVSYC DIL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.22e-47FAR1 family protein