PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8352207.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 90aa    MW: 10005.3 Da    PI: 10.9433
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8352207.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP268.21.6e-212474256
                        AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                               +y+GVr ++ +gr++AeIrdp   gk++r++lg+f+taeeAa+a+++a+++++g+
  Rmu_co8352207.1_g000001.1 24 RYRGVRKRP-WGRYAAEIRDP---GKKTRVWLGTFDTAEEAARAYDKAAREYRGA 74
                               59*******.**********8...557**************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 90 aa     Download sequence    
MAPKTAAKSG SGTQNPKPNS LEIRYRGVRK RPWGRYAAEI RDPGKKTRVW LGTFDTAEEA  60
ARAYDKAARE YRGAKAKTNF PTPAELHANT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15210.16e-28ERF family protein