PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_co8359043.1_g000001.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

bHLH

Protein Properties

Length: 102aa MW: 11410.6 Da PI: 9.9057

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_co8359043.1_g000001.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	33.2	9.4e-11	73	100	3	30
HHHHHHHHHHHHHHHHHHHHHHCTSCCC CS HLH 3 rahnerErrRRdriNsafeeLrellPka 30 ++h+++E+rRRdriN +++Lr+l+P++ Rmu_co8359043.1_g000001.1 73 KSHSQAEKRRRDRINAQLATLRKLIPQS 100 79************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 102 aa Download sequence
MEKCYSAEGP NWVNQHQTAT AVSNESSSFQ VPWPHVSHVS KPTQFQFSGR FPPSWSSTAE 60 GIAEEDRAAS ASKSHSQAEK RRRDRINAQL ATLRKLIPQS DK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40200.1	4e-12	bHLH family protein