PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8365147.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 182aa    MW: 19036 Da    PI: 9.4662
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8365147.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP249.21.3e-1562110255
                        AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                                 y+G+r ++ +g+Wv+eIr+p++   + r++lg++  +e+Aa+a++ a+ +l+g
  Rmu_co8365147.1_g000001.1  62 LYRGIR-CR-SGKWVSEIREPRK---SNRIWLGTYAKPEMAAAAYDVAAIALKG 110
                                69***9.55.6*********954...49**********************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    
MADPYGNVPK SDDQPSNSNP PFFIQLPPTS SSSDVNDQQH HDLLGLRSPT GGSISSPGRH  60
PLYRGIRCRS GKWVSEIREP RKSNRIWLGT YAKPEMAAAA YDVAAIALKG PDTALNFPNA  120
LITYPIPASS AASDIRAAAA RAAASRAENI KPGESSSGGA AGRVENVHRS GGGRGTGVTS  180
DD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.11e-24ERF family protein