PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8365561.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family MYB_related
Protein Properties Length: 205aa    MW: 23724.6 Da    PI: 8.7074
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8365561.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding52.41.2e-161357147
                               TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
            Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                               rg  T+ E+ +++++++++G++ W+tIar ++ gRt++++k++w+++
  Rmu_co8365561.1_g000001.1 13 RGQITPHEESIILELHARWGNR-WSTIARSLP-GRTDNEIKNYWRTH 57
                               7888******************.*********.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    
LRWVNYLRPD LKRGQITPHE ESIILELHAR WGNRWSTIAR SLPGRTDNEI KNYWRTHFKK  60
KAKVPSDASE KAKTRLLRRQ QFHHQQQQQQ QLQLINQADM KRIMALLDEN DTKISSWPPQ  120
AAQGKQDVDT STIAYPNHTI TEEQGFFYSM LNGNVPQQVA EASSSEDSFL WDGLWNLDDV  180
HVNFTTSSCA TGKASTFHNF VVPFC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24310.14e-57MYB family protein