PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8365921.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family bHLH
Protein Properties Length: 160aa    MW: 18093.3 Da    PI: 7.6959
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8365921.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.61.5e-102767954
                               HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                        HLH  9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                                r RR+ri ++f  L++l+P       +Kl+ +++Le+A++Y+k L
  Rmu_co8365921.1_g000001.1 27 ARERRHRISERFKILQSLVPGG-----TKLDTVSMLEEAIQYVKFL 67
                               699*****************87.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 160 aa     Download sequence    
MKKSTSGNDQ KSKNKVKLST DPQSVAARER RHRISERFKI LQSLVPGGTK LDTVSMLEEA  60
IQYVKFLKSQ IWLHQTMINF AGDDDTQYYD HDPTSGNVFQ LPVHHGHPVD PPHQQALCYG  120
QNSFVGTSSV QPSVPVMPEY SCFQGQEATP NIEAYMKYYS