PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8370125.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family B3
Protein Properties Length: 135aa    MW: 15220.3 Da    PI: 8.3284
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8370125.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B353.93.4e-1721114197
                                EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEE CS
                         B3   1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvv 81 
                                f+k++++ + + s  l +p +f +eh  +     +++++l++++g+ W+v+   + k++  +++ +GW  Fv+ n+++ gD+++
  Rmu_co8370125.1_g000001.1  21 FVKIMKKFNISGSYTLKIPYQFSTEHlpN----YKTEIVLRNSKGECWTVNSVPDSKGRVvHTFCGGWMAFVRGNDVNIGDICI 100
                                778888888888899***********533....3468***************5544444379999******************* PP

                                EEE-SSSEE..EEEEE CS
                         B3  82 Fkldgrsefelvvkvf 97 
                                F+l+g  ++e++v++ 
  Rmu_co8370125.1_g000001.1 101 FELVG--KREMRVHIS 114
                                **998..555677765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 135 aa     Download sequence    
MRLTLDEEKA ARSFTSCFPN FVKIMKKFNI SGSYTLKIPY QFSTEHLPNY KTEIVLRNSK  60
GECWTVNSVP DSKGRVVHTF CGGWMAFVRG NDVNIGDICI FELVGKREMR VHISGADKNG  120
FDHQGGEATT NAEYS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42700.17e-13B3 family protein