PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8374589.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 261aa    MW: 29433.9 Da    PI: 5.4667
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8374589.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.81.3e-18105155255
                        AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                                 y+GVr+++ +g+++AeIrd +    +  r++lg+f++ae Aa a+++a+ +l+g
  Rmu_co8374589.1_g000001.1 105 SYRGVRRRP-WGKYAAEIRDSTR---HgVRVWLGTFDSAEAAALAYDQAAFSLRG 155
                                69*******.**********422...25*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
MESYSLFQFS NPSQFSPESS FGSSLDSFSW DDDLLDTFNN DMLNFPPFNT NHEPQDLLLF  60
DAVAKEPALV AEETHWFGGA VKEEEVTSNS NAFQVFEGKP RKEKSYRGVR RRPWGKYAAE  120
IRDSTRHGVR VWLGTFDSAE AAALAYDQAA FSLRGPLAVL NFPVEVVRES LQEIKCRYDE  180
GCSPIVALKR RHSTRRKSLC KKNSCNKEQG KVKSSIPSKV TKNKTQENVV TQNVVVLEDL  240
GAEYLEELLY QSSCESASFS C
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.12e-42ERF family protein