PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8376349.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family C3H
Protein Properties Length: 252aa    MW: 27024.1 Da    PI: 8.833
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8376349.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH192.5e-06203225426
                                ---SGGGGTS--TTTTT-SS-SS CS
                    zf-CCCH   4 elCrffartGtCkyGdrCkFaHg 26 
                                ++C +f  +  C++G++C+F H+
  Rmu_co8376349.1_g000001.1 203 KPCIYFNSSRGCRHGANCSFQHD 225
                                69********************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    
MHGTPAQSQS SAANNRNLIA SSKPTAGTPI GVEPNVVAAA SAALGAIMNG NNEHGNMIDH  60
ELLIQILSNP KMIEKLVTDP QAVTRSPSMT SSDPFPLHIN NTESIAPLST APSSGHFYPQ  120
ANMGGMGHLS DQSLLSSIPV SSSPSVGPPP AKDINYYKSL IQQHGGDRHD SFPPFGNRPS  180
HHSANQESFN GYKSRDSKPK IMKPCIYFNS SRGCRHGANC SFQHDASFQQ QGSRVPEVQN  240
AKRMKVDREI SS