PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8376609.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family G2-like
Protein Properties Length: 287aa    MW: 31283.5 Da    PI: 9.5883
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8376609.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like86.42.9e-2781134155
                    G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                                kpr++W  eLH++Fv av+qL G e+A+Pk+il+lm+v+gL++e+v+SHLQkYR 
  Rmu_co8376609.1_g000001.1  81 KPRVVWYGELHRKFVAAVNQL-GVERAVPKKILDLMDVEGLSRENVASHLQKYRQ 134
                                79*******************.********************************6 PP
2Myb_DNA-binding32.61.9e-1084133248
                                SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
            Myb_DNA-binding   2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                                  W  e++ ++v av+qlG +   +k+I   m  +g++++++ s++qky+
  Rmu_co8376609.1_g000001.1  84 VVWYGELHRKFVAAVNQLGVEraVPKKILDLMDvEGLSRENVASHLQKYR 133
                                56888********************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    
EELKNIWQHV VRKKFDSKDQ KKSSNQDKSN GIGEGVQGAS PTGSSDQNGK LSKKRKDQNG  60
DEEEESEDDE HETEDSSSQK KPRVVWYGEL HRKFVAAVNQ LGVERAVPKK ILDLMDVEGL  120
SRENVASHLQ KYRQYLKRIS SGMVGSLGGK ESSYVRMGVL DGSRDLQSLR SGRISSTTLS  180
TYTSGGMLSR LNSPAGLSTG GITSSGLGQP GHSQNVSNYI NPFAKLQPTV PPNQSSNSFQ  240
ATPALLQLNQ LQQSKCITHN GKSYPDNDST NYTISSTFRN SGVSSSP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58080.11e-38ARR-B family protein