PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8377151.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family MYB_related
Protein Properties Length: 96aa    MW: 11137 Da    PI: 7.5005
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8377151.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding28.34.1e-09540340
                               SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS
            Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40
                                WTteE + ++++ +++G++ W ++a+ +  +R+l+++
  Rmu_co8377151.1_g000001.1  5 QWTTEELKHFYEGYRKYGKD-WMKVASVVR-HRSLENV 40
                               6*****************99.*********.***9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 96 aa     Download sequence    
MLGPQWTTEE LKHFYEGYRK YGKDWMKVAS VVRHRSLENV EALYTMNRAY LSLPEGAASV  60
IGLTAMMCDY YSMLVSLDFI FAFLVDRLCI ASEHKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21430.27e-36MYB_related family protein