PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8395735.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family B3
Protein Properties Length: 259aa    MW: 28886.4 Da    PI: 9.0091
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8395735.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B345.11.7e-141582501199
                                HHTT-EE--HHH.HTT....---..--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
                         B3  11 lksgrlvlpkkfaeeh....ggkkeesktltled.esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 
                                 k  +l+l+ +   ++    g k+ +++ l++   ++   W+v+++y+  + ++ l++GW++Fv+ n+L++gD++ F+l+++ +
  Rmu_co8395735.1_g000001.1 158 IKGTMLWLSAEISMNMltylG-KNSGNVSLSVSEgSTRGLWTVEMKYDTERATFRLQSGWNKFVQGNNLNAGDVCGFMLIDEIG 240
                                555555555555433355543.333444455544244489****************************************9977 PP

                                E..EEEEE-S CS
                         B3  90 felvvkvfrk 99 
                                  + v +fr+
  Rmu_co8395735.1_g000001.1 241 LLFEVNIFRR 250
                                7789999987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    
WEVEVTGHNG HFWFEKGWED FSKFYSLQSH DSLAFQYEAN SRFKVNIFDK SKTEIDYPIK  60
SPNMQENGVN DHSPPASPPL PQKKRGATSS GGKKDLSAEK DEGGKSSTTQ RSQKPTTEVP  120
MRMHSSATGG KATALQRAKE FKSRNPSCFL VIMHASYIKG TMLWLSAEIS MNMLTYLGKN  180
SGNVSLSVSE GSTRGLWTVE MKYDTERATF RLQSGWNKFV QGNNLNAGDV CGFMLIDEIG  240
LLFEVNIFRR TEVATSSPG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.17e-21B3 family protein