PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_co8397147.1_g000001.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

DBB

Protein Properties

Length: 295aa MW: 31462.8 Da PI: 4.6229

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_co8397147.1_g000001.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	23.3	1.3e-07	13	44	4	36
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg 36 C+ ++e+++ l+C+ ++ lC C ++ H g Rmu_co8397147.1_g000001.1 13 IPCDFCSEQPAVLYCKADSAKLCLFCDQHVH-G 44 57**************************999.4 PP
2	zf-B_box	22.2	3e-07	55	100	3	42
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 ++C+++ + + + C +++ lC++C H + H+++p+ Rmu_co8397147.1_g000001.1 55 SQICDNCASDAVAFRCSTDNLVLCHECDWDAHGScsvsaaHDRTPI 100 689****99***************999955889999988876 PP

Sequence ? help Back to Top
Protein Sequence Length: 295 aa Download sequence
MVSSKPATAG ESIPCDFCSE QPAVLYCKAD SAKLCLFCDQ HVHGANLLSR KHVRSQICDN 60 CASDAVAFRC STDNLVLCHE CDWDAHGSCS VSAAHDRTPI EGFSGCPSPL ELAALWGLDL 120 HKNIPGRVGG GGDPVDPTRN WELESSWSGV NFQDLIVPSQ NGEVYRNCGE SAPAKRQGSG 180 GSLGKYKQGI QKQLVELLKR DFDGGGENLE PAAAEGNDNG SNNVNVNVNV NVNAEGFDVE 240 NGRVDGVNVG SVAVSQPLLQ QQAPFTSLLM MAEGIVDRDM LWDTNPHGHN TQGTQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28050.1	3e-65	CO-like family protein