PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8408129.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family C2H2
Protein Properties Length: 183aa    MW: 19956.1 Da    PI: 7.1629
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8408129.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.88e-051032123
                               EEETTTTEEESSHHHHHHHHHHT CS
                    zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                               y+C+ C + F++   L  H+++H
  Rmu_co8408129.1_g000001.1 10 YTCTFCRREFRSAQALGGHMNVH 32
                               9********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    
MGTTWPPRSY TCTFCRREFR SAQALGGHMN VHRRDRARLH QVQHPSSISI NPSAVSSSSS  60
SFIIPTQEFI AANGGLCLLY QLPNPNNGAF NTSTATTPTA PLLNNTIESS SSVPSTLLSI  120
TPNPPHDYLM TSSSCLVEPH GVFNSRNNSH CQYAKRSADQ DQPSRSGVED IEELDLELRL  180
GPS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17810.12e-21C2H2 family protein